Arafat Rahman

Tag: assembly

  • Annotation of Bacterial Genomes

    Annotation of Bacterial Genomes

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    in ,

    — 35 reads

    This is Part 5 of tutorial series: NGS Workflow for Genome Assembly to Annotation for Hybrid Bacterial Data  We’ll be use hybrid sequencing data (Illumina and Nanopore). This tutorial has five parts.  Disclaimer: This post is a work in progress. This is genome assembly and annotation workflow that I use for microbial genomics. Previously, I used…

  • Hybrid Assembly of Bacterial Genome

    Hybrid Assembly of Bacterial Genome

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    in ,

    — 29 reads

    This is Part 4 of tutorial series: NGS Workflow for Genome Assembly to Annotation for Hybrid Bacterial Data  We’ll be use hybrid sequencing data (Illumina and Nanopore). This tutorial has five parts.  Disclaimer: This post is a work in progress. This is genome assembly and annotation workflow that I use for microbial genomics. Previously, I used…

  • Microbial De Novo Genome Assembly from Long-Read Data

    Microbial De Novo Genome Assembly from Long-Read Data

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    in ,

    — 34 reads

    This is Part 3 of tutorial series: NGS Workflow for Genome Assembly to Annotation for Hybrid Bacterial Data  We’ll be use hybrid sequencing data (Illumina and Nanopore). This tutorial has five parts.  Disclaimer: This post is a work in progress. This is genome assembly and annotation workflow that I use for microbial genomics. Previously, I used…

  • Microbial De Novo Genome Assembly from Short-Read Data

    Microbial De Novo Genome Assembly from Short-Read Data

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    in ,

    — 50 reads

    This is yet another tutorial on microbial genome assembly. This is actually the Part 2 of tutorial series: NGS Workflow for Genome Assembly to Annotation for Hybrid Bacterial Data  In this series we’ll be use hybrid sequencing data (Illumina and Nanopore). This tutorial has five parts.  Part 1: Downloading and preparing data Part 2: Assembly with…