Tag: fastq

  • A tool to visualize fastq alignment with quality-score

    A tool to visualize fastq alignment with quality-score

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    — 195 reads

    Do you need to eyeball through fastq alignment file, with special features to highlight the quality score of each bases? Introducing fastqviz, a Streamlit app which can do just that. I made it quite some time ago to visualize some amplicon data for my own project. You can upload your fastq file. The fastqviz viewer…